cryoSPARC Discuss

Topic		Replies	Views	Activity
Note on csparc2star.py and particle coordinates Hi all, Quick update on converting particle coordinates. As --swapxy was always needed for correct coordinate output, it is now the default. If you pass the argument, you will be reminded that it is no longer needed. T…		1	49	June 25, 2022
Before You Post: Troubleshooting Guidelines Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. Before you post your topic, check the following items: Are you on the latest version of cryoSPARC? cryosparcm update and see Softw…		0	4616	October 15, 2018
Patch CTF result CTF Estimation open		0	10	June 27, 2022
Repopulating workspaces.json Import and Export open , issue_recorded , 1692		8	123	June 27, 2022
4.52 Å resolution for RNA-only structure, but helices are not visible in density map 3D Refinement		2	16	June 27, 2022
How to combine two particles sets from two different projects in cryosparc 2.15? Import and Export closed		7	873	June 27, 2022
Gain reference from falcon4 camera Import and Export open		7	364	June 27, 2022
Possible bug in hetero refinement? 3D Refinement		0	31	June 26, 2022
3D classification - combine similar classes? 3D Classification open , request_recorded , 1628		3	371	June 26, 2022
Change size of spherical mask in heterogeneous refinement 3D Refinement		0	24	June 26, 2022
Specify alignment resolution and output box size separately for 3D classification 3D Classification		2	53	June 26, 2022
Motion corrected micrographs from Relion 3.1.3 Import and Export hold-off		8	170	June 26, 2022
Trouble Importing Micrographs to Directory Outside of Cryosparc Folder Import and Export		0	37	June 25, 2022
Topaz model import Particle Picking later-for-dashboard , hold-off , user-advice		4	71	June 25, 2022
Ab-initio was terminated abnormally Troubleshooting		1	36	June 24, 2022
Patch motion correction cuMemAlloc failed: out of memory Troubleshooting open		1	44	June 24, 2022
Query Mongodb for file paths Data Management open		1	35	June 24, 2022
CUDA memory error during 2D classification 2D Classification hold-off , open		16	1178	June 24, 2022
Benefits of Topaz denoise Tips closed	$diffracteD - Frequent Poster$	5	678	June 24, 2022
Zero intensity in patch CTF estimation CTF Estimation open		3	363	June 23, 2022
Estimated error of translations/rotations 3D Refinement open		5	116	June 23, 2022
Gpu/RAM/disk space usage via web-interface? Features and Functionality open		2	107	June 23, 2022
Displaying exported picks Particle Picking hold-off , user-advice		1	62	June 23, 2022
Topaz train uses only CPU Particle Picking open	$diffracteD - Most Recent Poster$	4	518	June 22, 2022
Inspect picks should not require pick_stats Features and Functionality 1143 , request_recorded		2	383	June 22, 2022
New MotionCor2 -LogDir flag Motion Correction issue_recorded , 1693		1	39	June 22, 2022
Ab initio classification: "all particles must have the same data sign" 3D Reconstruction open		5	66	June 22, 2022
Delete extracted particles from cryosparc live? CryoSPARC Live issue_recorded , open , 1699		4	64	June 22, 2022
Worker using VMware Bitfusion Install, Configure and Update hold-off		0	30	June 22, 2022
Failed to unlink socket file for database spawn error Troubleshooting open		3	53	June 22, 2022

Note on csparc2star.py and particle coordinates

Hi all, Quick update on converting particle coordinates. As --swapxy was always needed for correct coordinate output, it is now the default. If you pass the argument, you will be reminded that it is no longer needed. T…

1

49

June 25, 2022

Before You Post: Troubleshooting Guidelines

Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. Before you post your topic, check the following items: Are you on the latest version of cryoSPARC? cryosparcm update and see Softw…