CryoSPARC Discuss

Topic	Replies	Views	Activity
Before You Post: Troubleshooting Guidelines Troubleshooting Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. Before you post your topic, check the following items: Are you on the latest version of cryoSPARC? cryosparcm update and see Softwar…	0	12610	October 15, 2018
Encountered a Closed Topic? Troubleshooting Forum moderators may Close topics for various reasons. If you find that a topic to which you would like to add a post has been Closed, please Create a new topic for your post. In your post, include the URL of the topic…	0	1857	November 30, 2023
All jobs are stuck in queue forever for v5 Install, Configure and Update	2	12	April 13, 2026
Reset password using v5 cli Scripting	4	5	April 13, 2026
Error during local refinement: "object has no attribute 'seek'" Local Refinement	2	29	April 13, 2026
Heterogeneous Refinement fails in v 4.5.1 3D Refinement	39	1294	April 13, 2026
Ab-init running forever 3D Reconstruction	8	72	April 13, 2026
Status of CRYOSPARC_TIFF_IO_SHM in > v4.5.3? Import and Export	1	36	April 13, 2026
Using particles.blob accurately Local Refinement	5	84	April 13, 2026
Hide jobs from other workspaces in tree view Application	8	677	April 13, 2026
Honeycomb like noise in 2d class 2D Classification	11	1276	April 13, 2026
3DVA Distribution Reaction Coordinate Plots 3D Variability Analysis	0	11	April 13, 2026
Weird GFSC curve and the reported resolution is different what i see in density Cryo-EM Data Processing	1	28	April 13, 2026
Live profile bug in v4 > v5 CryoSPARC Live	6	55	April 13, 2026
Extracting particles with different alignments3D pixel sizes from the same dataset Particle Picking	0	16	April 13, 2026
Per class symmetry enforcement during heterogeneous refinement 3D Refinement feature_request	1	51	April 12, 2026
How to preserve a flexible peripheral protein density before Helical Refinement, and how to assess whether the final reconstruction is reliable? Helical Processing	0	29	April 11, 2026
Database fails to start after upgrade from v4.7.1 to v5.0.4: No such file or directory: 'mongo' Install, Configure and Update	0	19	April 10, 2026
How to force 3D classification with alignment? Cryo-EM Data Processing	7	139	April 10, 2026
Apply Trajectories failing Motion Correction	3	67	April 9, 2026
FSC curve data from a sharpening tool job Utilities	2	77	April 9, 2026
Cryosparc tools wrapper & blueprint? Scripting feature_request	0	56	April 9, 2026
Topaz Train FileNotFoundError v5.0.1 Particle Picking	0	17	April 9, 2026
Same Job UIDs when running create_job() Scripting	1	15	April 9, 2026
Streaky 3D refinements for a small protein Cryo-EM Data Processing	3	110	April 9, 2026
Poor local refinement density because bad particles? Or something else Cryo-EM Data Processing	0	46	April 8, 2026
Ref auto select 2D - show comparisons of projections & classes for all modes Particle Curation feature_request	0	28	April 8, 2026
Per user slurm script template Install, Configure and Update feature_request	3	57	April 8, 2026
Ability to override the number of asymmetric units to search during helical refinement Helical Processing	1	33	April 8, 2026
"Child process with PID has terminated unexpectedly" during patch motion correction Troubleshooting	7	2639	April 7, 2026

Before You Post: Troubleshooting Guidelines

Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. Before you post your topic, check the following items: Are you on the latest version of cryoSPARC? cryosparcm update and see Softwar…

0

12610

October 15, 2018

Encountered a Closed Topic?

Troubleshooting

Forum moderators may Close topics for various reasons. If you find that a topic to which you would like to add a post has been Closed, please Create a new topic for your post. In your post, include the URL of the topic…