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Monitoring CPU, Memory and GPU Usage
When running cryoSPARC, it can be valuable to keep track of your worker instance’s hardware statistics to understand more about the resource usage of a job. In particular, monitoring the utilization of GPUs running cryoS…
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3
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April 9, 2020
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Csparc2star.py final update
Hi csparc2star.py users. I made a major change to csparc2star.py in what is very likely to be the last update given the upcoming built-in import/export tools.
The new version supports any number of .cs files as input. T…
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33
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March 30, 2020
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Before You Post: Troubleshooting Guidelines
[image]
Dear cryoSPARC users,
Thank you for communicating with us on the discussion forum. To make it easier for us to understand and troubleshoot issues and errors encountered, please use the following template to pr…
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1
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October 15, 2018
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Sample projection from a uniform distribution over SO(3) for Simulate Data job
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1
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May 28, 2020
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Error in non-uniform refinement
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6
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May 28, 2020
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Patch CTF and curate exposures - print statistics?
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4
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May 28, 2020
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Fundamental flaw on particle locations
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7
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May 27, 2020
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Improvements for clusters
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18
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May 27, 2020
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Recover jobs that were deleted?
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7
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May 27, 2020
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Extract from micrographs shows neither error nor output
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3
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May 27, 2020
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"list index out of range" error message while trying to run job after fresh installation
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3
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May 27, 2020
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CryoSparc 2.13.2: Patch motion correction (multi) runs very slow
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14
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May 27, 2020
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Download archive of 3D classes
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15
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May 27, 2020
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Output particles in "intermediates" mode of 3D-variability display?
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13
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May 26, 2020
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Problem updating to 2.15
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5
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May 26, 2020
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Storage of raw data
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1
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May 26, 2020
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Issues with Patch CTF after Patch Motion Correction
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6
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May 26, 2020
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CPU parallelization of particle extraction? [Feature request]
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3
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May 26, 2020
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IndexError parsing motioncor2 results
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1
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May 25, 2020
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Add custom submission parameters to jobs
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3
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May 26, 2020
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Convert .cs file to star in 2D selection job
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8
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May 25, 2020
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Check if data to be cached is larger than available cache quota
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2
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May 25, 2020
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Resolution in FSC
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11
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May 25, 2020
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Local refinement artifacts, spikes, possibly over refinement
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6
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May 25, 2020
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Inspect picks slowness and suggestion
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2
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May 22, 2020
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Importing motion corrected micrograph
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3
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May 22, 2020
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Bug in template picker - ignores filter resolution
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1
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May 22, 2020
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Small membrane proteins: 2D classification and ab-initio reconstruction
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4
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May 21, 2020
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Full-frame motioncorrection fails on second movie, processes one fine (cuMemAlloc failure)
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11
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May 21, 2020
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I can't enter the http://<workstation_hostname>:39000
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4
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May 21, 2020
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