Monitoring CPU, Memory and GPU Usage [Tips] (2)

When running cryoSPARC, it can be valuable to keep track of your worker instance’s hardware statistics to understand more about the resource usage of a job. In particular, monitoring the utilization of GPUs running cryoS…

Csparc2star.py final update ( 2 ) [Import and Export] (23)

Hi csparc2star.py users. I made a major change to csparc2star.py in what is very likely to be the last update given the upcoming built-in import/export tools. The new version supports any number of .cs files as input. T…

Before You Post: Troubleshooting Guidelines [Troubleshooting] (1)

[image] Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. To make it easier for us to understand and troubleshoot issues and errors encountered, please use the following template to pr…

V2.12.4 Installation error [Install, Configure and Update] (1)
Patch CTF Job Fails: Child process with PID 31697 has terminated unexpectedly [Troubleshooting] (12)
Csparc2star.py issue [Troubleshooting] (7)
CryoSparc 2.12.4: Patch motion correction (multi) Error [Troubleshooting] (6)
Error during patch motion correction of movies in cryosparc v2.12.4 [Motion Correction] (17)
Local symmetry operators for refinement [Features and Functionality] (5)
Particle selection by statistics [Features and Functionality] (1)
2D classification ValueError: total size of new array must be unchanged [Troubleshooting] (1)
Class 2D Error= ValueError: total size of new array must be unchanged [Troubleshooting] (4)
Ab Initio reconstruction chirality issue [Cryo-EM Data Processing] (5)
Global CTF runs out of memory [CTF Refinement] (3)
Option to keep alignments3D/split (random subset) during 3D refinement (feature request) [3D Refinement] (3)
Command_vis: ERROR (spawn error) [Troubleshooting] (1)
ValueError: total size of new array must be unchanged [Troubleshooting] (5)
Template Picker error: cufftAllocFailed [Particle Picking] (11)
Verisonv2.12.4 update failed about downloading new package [Install, Configure and Update] (1)
Ctfrefine in new Homogenous refinement [CryoSPARC Parameters] (1)
Exposure group splitting using regular expressions [Features and Functionality] (11)
Possible to invert hand of 3D variability output? [3D Variability Analysis] (3)
About local motion correction in cryosparc [Motion Correction] (3)
Using particles from "cluster" mode in 3D-VA for refinement fails [3D Variability Analysis] (7)
Focused classification of asymmetric features in icosahedral virus [Cryo-EM Data Processing] (2)
How to choose a fulcrum for local refinement? ( 2 ) [Local Refinement] (27)
Pycuda error “__shfl_down_sync” during Homogenous Refinement (NEW) [Troubleshooting] (6)
FmDose for Motioncor2 wrapper [Motion Correction] (3)
Can not run jobs anymore 2.12.2 and.2.12.4 [Troubleshooting] (3)
Error while trying to do 2D class [2D Classification] (2)