Monitoring CPU, Memory and GPU Usage [Tips] (2)

When running cryoSPARC, it can be valuable to keep track of your worker instance’s hardware statistics to understand more about the resource usage of a job. In particular, monitoring the utilization of GPUs running cryoS…

Csparc2star.py final update ( 2 ) [Import and Export] (23)

Hi csparc2star.py users. I made a major change to csparc2star.py in what is very likely to be the last update given the upcoming built-in import/export tools. The new version supports any number of .cs files as input. T…

Before You Post: Troubleshooting Guidelines [Troubleshooting] (1)

[image] Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. To make it easier for us to understand and troubleshoot issues and errors encountered, please use the following template to pr…

Total size of new array must be unchanged [Troubleshooting] (5)
Patch motion correction [Motion Correction] (2)
High resolution image of 2D classification [2D Classification] (5)
Multi-lane cluster configuration problem [Install, Configure and Update] (1)
Setting a new ssd [Install, Configure and Update] (1)
Problems installing cryosparc on workstation Ubuntu 18.04.3 LTS [Install, Configure and Update] (4)
Database - fatal - exited too quickly [Troubleshooting] (7)
Exact meaning of Window inner radius and Window outer radius in refinement [Troubleshooting] (5)
Option to keep alignments3D/split (random subset) during 3D refinement (feature request) [3D Refinement] (1)
Squashed ab initio model for icosahedral virus [CryoSPARC Parameters] (3)
Particle extraction with local motion correction using existing trajectory [Features and Functionality] (4)
File r/w permissions [Install, Configure and Update] (3)
Database failure [Troubleshooting] (7)
What is the "export" feauture? [Install, Configure and Update] (3)
cufftAllocFailed in 2D classification [Troubleshooting] (2)
Database migration notifications [Troubleshooting] (2)
cryoSPARC is running but supervisorctl doesn't think so [Troubleshooting] (2)
Symmetry expand and particle subtraction [Local Refinement] (2)
Export particles coordinates to relion for re-extraction [Import and Export] (3)
Web app doesn't load, status is normal [Troubleshooting] (7)
Standalone installation option as root [Install, Configure and Update] (2)
Database did not migrate all projects [Troubleshooting] (6)
Curating exposures after movie ctf [Troubleshooting] (3)
How is cluster_job_id generated? [Install, Configure and Update] (1)
"Load more" fails to show any more jobs from the history [Troubleshooting] (3)
Extract job history - How? [Features and Functionality] (2)
Sharing same database between different instances [Install, Configure and Update] (3)