CryoSPARC Discuss

Topic	Replies	Views	Activity
Before You Post: Troubleshooting Guidelines Troubleshooting Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. Before you post your topic, check the following items: Are you on the latest version of cryoSPARC? cryosparcm update and see Softwar…	0	12634	October 15, 2018
Encountered a Closed Topic? Troubleshooting Forum moderators may Close topics for various reasons. If you find that a topic to which you would like to add a post has been Closed, please Create a new topic for your post. In your post, include the URL of the topic…	0	1864	November 30, 2023
Relationship between extraction boxsize and reference pixelsize/boxsize Automated Workflows	4	46	April 24, 2026
Authentication Failed Code 18 Troubleshooting	0	2	April 24, 2026
Error in Local Refinement Local Refinement	4	54	April 24, 2026
Cryosparc tools wrapper & blueprint? Scripting feature_request	2	100	April 23, 2026
HR with input volumes with different box size or pix size Cryo-EM Data Processing	0	26	April 23, 2026
Failed in 2D, v5.0.2 Install, Configure and Update	9	150	April 23, 2026
Database backup to NFS file system incorrectly claims directory is not writable Install, Configure and Update	0	15	April 23, 2026
Can't change classification uncertainty in live 2D jobs without error 2D Classification	3	44	April 23, 2026
Denoiser jobs are annotated with number of training mics even when model is supplied Utilities	0	23	April 23, 2026
Denoiser (or Patch Motion) should output training mics as a separate slot Features and Functionality feature_request	6	125	April 23, 2026
Creating workflow very slow or not responsive Automated Workflows	7	58	April 22, 2026
Json files are lost. Can we still resurrect (attach) our project? Import and Export	5	77	April 22, 2026
New Feature for Local Refinement? Built-in Particle Subtraction and map Auto-Centering Local Refinement feature_request	0	36	April 22, 2026
CryoSPARC job error (numpy.linalg.LinAlgError: Singular matrix) Troubleshooting	6	101	April 22, 2026
cryoSPARC v5-beta user interface feels slow Application	8	171	April 21, 2026
Topaz Train FileNotFoundError v5.0.1 Particle Picking	3	49	April 21, 2026
All jobs are stuck in queue forever for v5 Install, Configure and Update	3	64	April 21, 2026
New IP address: Failed to launch! 255 ssh Install, Configure and Update	4	44	April 21, 2026
Undo symmetry expansion 3D Classification feature_request	6	167	April 21, 2026
Images scaling to reference map Troubleshooting	4	75	April 20, 2026
Unable to delete [workspace]: Session is compacting, must be paused, completed or compacted" Troubleshooting	2	38	April 20, 2026
Data processing help / Can I get higher resolution? Cryo-EM Data Processing	16	374	April 20, 2026
2D classification issues Cryo-EM Data Processing	6	118	April 20, 2026
How can I modify the status of jobs that have been deleted on the web interface but are still recorded as running in the database? Troubleshooting	4	61	April 20, 2026
NaN error during ab-initio 3D Reconstruction	2	62	April 19, 2026
Error during local refinement: "object has no attribute 'seek'" Local Refinement	11	92	April 19, 2026
Symmetry alignment in refinement flips volume that is already aligned Troubleshooting	0	18	April 16, 2026
Inspect picks after filament tracer in V5 Helical Processing	4	76	April 19, 2026

Before You Post: Troubleshooting Guidelines

Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. Before you post your topic, check the following items: Are you on the latest version of cryoSPARC? cryosparcm update and see Softwar…

0

12634

October 15, 2018

Encountered a Closed Topic?

Troubleshooting

Forum moderators may Close topics for various reasons. If you find that a topic to which you would like to add a post has been Closed, please Create a new topic for your post. In your post, include the URL of the topic…