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About the 3D Refinement category
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1
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1033
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December 31, 2024
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Decent 2D classes of 60 kDa protein, but unable to get high resolution 3D reconstruction
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6
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201
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March 23, 2026
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NU refinement in v5.0.2
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12
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218
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March 18, 2026
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The FSC curve becomes a wavy (oscillating) pattern
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8
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126
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March 13, 2026
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Sharp drops in FSC beyond 3.5 A^ range (fixable by CTF refinement)
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6
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135
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March 12, 2026
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Warnings on NU-Refinement after 3DVA on v4.5.3
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2
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39
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March 10, 2026
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NU Refinement memory issues
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4
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81
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March 9, 2026
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Bogus NaN particle warnings in refinement
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16
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814
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February 18, 2026
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Ab initio refinement suggestion
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1
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97
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February 17, 2026
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Ab initio refinement job query
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1
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90
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February 3, 2026
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NU Refinement job terminated abnormally from reextracted particles and
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3
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93
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November 27, 2025
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Can't see if FSC reached to zero
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3
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145
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October 31, 2025
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GSFSC curves fall very fast
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2
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151
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October 31, 2025
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Does cryosparc remove duplicate particles?
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12
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3980
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October 27, 2025
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Job process terminated abnormally-Non Uniform refinement
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1
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49
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October 9, 2025
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Mixing and matching particles.blob, particles.ctf etc - what can go wrong?
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6
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130
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September 17, 2025
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Advices for small transmembrane protein in 3D reconstruction
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8
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307
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September 11, 2025
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Sharp dropoff in non-autotightened FSC not related to (user-provided / dynamic) mask
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6
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203
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August 18, 2025
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Weird result of NU refinement
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22
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366
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August 5, 2025
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Finding particles based on cFAR score, do I still have junk?
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7
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178
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July 31, 2025
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Particle order in refinement matters?
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11
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345
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July 29, 2025
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NU-refine runs too slow after using particles from local CTF refine
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1
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82
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July 28, 2025
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Help with Symmetry Alignment in non-uniform Refinement (C2 Symmetry Misaligned)
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2
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153
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July 26, 2025
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Inquiry regarding heterogenous refinement
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1
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77
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July 7, 2025
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Two Distinct Populations with Different Density Orientations in Refinement
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8
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201
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July 2, 2025
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Dealing with symmetry of nucleosome while processing
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4
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297
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July 1, 2025
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Random seed in heterogeneous refinement - query
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0
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69
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June 24, 2025
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Homogeneous refinement failed
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3
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84
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June 19, 2025
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(Bad) Symmetry alignment at the start of jobs (and workaround)
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4
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170
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June 10, 2025
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Unrealistic FSC for negative stain data: citation?
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0
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71
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June 6, 2025
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