Hi, I am using CryoSPARC v4.5.3, and doing ab-initio reconstruction with default parameters. However, I got following keyerror:
[CPU: 409.1 MB Avail: 237.26 GB]
Done.
[CPU: 409.1 MB Avail: 237.27 GB]
Windowing particles
[CPU: 409.1 MB Avail: 237.28 GB]
Done.
[CPU: 409.1 MB Avail: 237.28 GB]
Using 1 classes.
[CPU: 460.6 MB Avail: 249.20 GB]
Computing Ab-Initio Structure:
[CPU: 460.6 MB Avail: 249.23 GB]
Volume Size: 192 (voxel size 192.00A)
[CPU: 460.6 MB Avail: 249.26 GB]
Final Output Volume Size: 192
[CPU: 460.6 MB Avail: 249.29 GB]
Data Size: 192 (pixel size 192.00A)
[CPU: 460.6 MB Avail: 249.31 GB]
Resolution Range: 35.00A to 12.00A
[CPU: 460.6 MB Avail: 249.34 GB]
Fourier Radius Range: 1053.3 to 95.0 with steps of 0.040000
[CPU: 461.1 MB Avail: 249.45 GB]
Using random seed for initialization of 223841213
[CPU: 461.1 MB Avail: 249.45 GB]
Generating random initial densities.
[CPU: 461.1 MB Avail: 249.45 GB]
Generating random initial density for class 0
[CPU: 855.9 MB Avail: 238.83 GB]
Done in 22.781s.
Generated initialization!
[png]
[pdf]
J2_generated_initialization.png
[CPU: 863.9 MB Avail: 240.13 GB]
Full abinit run took 0.162s
[CPU: 837.0 MB Avail: 240.11 GB]
Traceback (most recent call last):
File "cryosparc_master/cryosparc_compute/run.py", line 115, in cryosparc_master.cryosparc_compute.run.main
File "cryosparc_master/cryosparc_compute/jobs/abinit/run.py", line 537, in cryosparc_master.cryosparc_compute.jobs.abinit.run.run_homo_abinit
KeyError: 'alignments_class_0'
How to solve this error? Thank you!