3D Classification

Topic	Replies	Views	Activity
New case study: Pseudosymmetry in TRPV5 and Calmodulin (EMPIAR-10256) education_and_advice New case study: Pseudosymmetry in TRPV5 and Calmodulin (EMPIAR-10256) Hello CryoSPARC users! Today we added a new case study to the CryoSPARC guide. This case study uses images of calmodulin-bound TRPV5 to explore di…	4	162	April 16, 2025
About the 3D Classification category	0	843	December 7, 2021
Class3D - write volumes periodically during O-EM iterations? feature_request	3	72	April 9, 2025
How to set up 3D classification in my specific case?	10	175	March 28, 2025
3D classification, all zeros output for alignments3d/error,error_min	1	48	February 24, 2025
3D classification crash	3	84	February 18, 2025
Conversion Between Euler Angles to AA representation	3	99	January 23, 2025
3D classification gives similar percentage of particles of each class	6	249	December 19, 2024
How to use selected downsampled and centered particles and original alignment box size etc.?	4	133	November 28, 2024
Benefits of providing both solvent and focus masks	3	451	November 25, 2024
3D Classification returning incorrect diagnostic plots	2	86	November 24, 2024
Number of particles to use for reconstruction in PCA initialization mode	2	129	November 21, 2024
Tips and Tricks for sorting compositional heterogeneity in image stacks	7	898	November 20, 2024
Encountered exception when trying to mark failed 3D class job as completed	3	95	November 18, 2024
What is the difference between “Filter resolution” and “High pass resolution” parameters	4	347	November 19, 2024
Suggested alteration to Class3D defaults feature_request	3	159	November 13, 2024
Symmetry expansion workflow for 3D classification	7	1723	November 8, 2024
Confused about the 3D Classification result. Is the volume real?	3	259	October 24, 2024
Force hard classification at last iteration in 3D classification and Heterogeneous refinement feature_request	4	307	October 22, 2024
3D classification wrong class number	2	156	October 11, 2024
Inconsistent assignment in 3D Classification when Hard Classification ON	1	175	September 27, 2024
Filter resolution in 3D Classification job	5	401	September 20, 2024
3D classification, Regroup 3D classes etc	1	327	August 20, 2024
Error in 3D classification indicates corrupt particles, but none are present	0	155	August 19, 2024
3D classification crash ending with AssertionError	4	417	August 8, 2024
Class similarity definition in 3D classification? feature_request	11	1297	July 8, 2024
Advice for 3D classification of noisy, flexible region	0	409	June 26, 2024
Error in 3D classification	1	309	June 25, 2024
Scale calculation for symmetry expanded particle sets	2	188	June 24, 2024
Interpretation of 3D Classification results	6	348	June 19, 2024

New case study: Pseudosymmetry in TRPV5 and Calmodulin (EMPIAR-10256)

education_and_advice

New case study: Pseudosymmetry in TRPV5 and Calmodulin (EMPIAR-10256) Hello CryoSPARC users! Today we added a new case study to the CryoSPARC guide. This case study uses images of calmodulin-bound TRPV5 to explore di…