Install, Configure and Update

Topic	Replies	Views	Activity
Patch 250814 is available for CryoSPARC v4.7.1 Release Notes Includes all release notes from previous patch 250811 Fixed Subset Particles by Statistic job no longer fails when manual thresholds are specified in the job builder (previously only included in v4.7.1-cu…	5	74	August 20, 2025
Patch 250811 is available for CryoSPARC v4.7.1 and v4.7.1-cuda12 Release Notes Fixed Ab-Initio Reconstruction no longer fails with a NaN error when one or more densities become completely empty. Subset Particles by Statistic job no longer fails when manual thresholds are specified in…	1	79	August 11, 2025
About the Install, Configure and Update category	1	2116	March 3, 2022
Migrating a db owned by a different user	3	449	August 16, 2025
Patch Motion Correction - RuntimeError: Could not allocate GPU array: CUDA_ERROR_OUT_OF_MEMORY	54	2726	August 13, 2025
cuMemHostAlloc & Out-of-Memory Errors	5	71	August 12, 2025
GPU dies few moments after cryoSPARC is started	1	53	August 6, 2025
CryoSPARC v5 beta?	2	128	August 5, 2025
"Error: Could not list directory" even after setting rights correctly	14	696	July 30, 2025
Cluster submission script stdout goes where?	2	41	July 29, 2025
Cryosparc stalls at command_core:started	2	23	July 29, 2025
Insufficient ram: 2GB available but 16GB requested. Job will continue, but may fail if the system runs out of memory	6	68	July 28, 2025
Computing error during motion correction	7	45	July 28, 2025
Put CryoSPARC sockets in separate /tmp directory	1	43	July 25, 2025
Nvidia cuda etc update	4	46	July 24, 2025
Version mismatch between worker and master	4	31	July 24, 2025
Invalid Password and username when signing in to CryoSPARC User Interface despite credentials apparently matching?	1	16	July 22, 2025
V4.7.1-cuda12 does not detect multiple SXM GPUs by default	6	83	July 18, 2025
Missing write permission for project container	3	48	July 17, 2025
HPC: CryoSPARC ports in use by other CryoSPARC users	2	60	July 15, 2025
How to calculate `--rams`	2	73	July 11, 2025
DOBASHRC=false does not prevent .bashrc from being updated	9	56	July 11, 2025
Set worker for CPU only job feature_request	1	41	July 10, 2025
CryoSPARC installation stuck at "command_core: started"	8	64	July 9, 2025
Add environment variable for log directory feature_request	5	717	July 9, 2025
Slurm node can not find master	3	53	July 7, 2025
Support for RTX5000 series GPUs?	37	1114	July 2, 2025
Job builder GUI is blank	8	385	June 27, 2025
Jobs Fail with Exit Code 35	18	69	June 27, 2025
Cryosparc sees wrong GPU	11	101	June 24, 2025

Patch 250814 is available for CryoSPARC v4.7.1

Release Notes Includes all release notes from previous patch 250811 Fixed Subset Particles by Statistic job no longer fails when manual thresholds are specified in the job builder (previously only included in v4.7.1-cu…

5

74

August 20, 2025

Patch 250811 is available for CryoSPARC v4.7.1 and v4.7.1-cuda12

Release Notes Fixed Ab-Initio Reconstruction no longer fails with a NaN error when one or more densities become completely empty. Subset Particles by Statistic job no longer fails when manual thresholds are specified in…

1

79

August 11, 2025

About the Install, Configure and Update category