Tips


Topic Replies Activity
Monitoring CPU, Memory and GPU Usage

When running cryoSPARC, it can be valuable to keep track of your worker instance’s hardware statistics to understand more about the resource usage of a job. In particular, monitoring the utilization of GPUs running cryoS…

3 April 9, 2020
About the Tips category 1 February 2, 2017
Particle statistics check 5 May 21, 2020
Micelle - particle subtraction 6 May 12, 2020
Preferential orientation - tilted collection? 9 May 6, 2020
Clear job feature & saving space 4 May 1, 2020
Bayesian Polishing of cryosparc-processed particles 14 April 10, 2020
Documentation on the outputs generated in cryoSparc 2 April 9, 2020
Wrapper script to check hostname 3 April 8, 2020
What jobs use dose (e/A^2) 5 April 7, 2020
How to join particles from two data sets at different pixel size? 2 March 18, 2020
Working remotely? Options for accessing cryoSPARC from home 2 March 17, 2020
Comprehensive Manual 2 March 16, 2020
Merging 2 datasets in cryosparcv2 13 March 11, 2020
Clear job from command line 2 March 4, 2020
Blob Picker picking around particles in v2.13.2 4 February 17, 2020
Subset selection from particles stack 4 February 13, 2020
The transfer from 3-fold axis to 5-fold axis in CryoSPARC2 1 May 21, 2019
Meaning of "current noise" in 2D classification 1 September 22, 2017
Export Project Missing 3 February 6, 2020
Symmetry and ab initio refinement 3 January 21, 2020
Info on how project and job directory sizes are calculated 1 September 18, 2019
Pruning prefencial orientation 9 August 27, 2019
Removing junk from data 3 August 13, 2019
When can we compress/move raw movies? 2 August 12, 2019
Visualizing orientation distribution other than heatmap? 13 April 11, 2019
Easy template picking 6 February 15, 2019
Local resolution of maps from Relion 5 February 11, 2019
How to add new users in CryoSPARC2? 5 November 13, 2018
Safe map sharpening 3 November 8, 2018