Scripting

Topic	Replies	Views	Activity
New CryoSPARC Tools tutorial video: Simple scripting for advanced cryo-EM processing education_and_advice Hello CryoSPARC users! We have just published a CryoSPARC Tools tutorial video on our YouTube channel. It covers the basics of how to get started with CryoSPARC Tools + Python scripting to facilitate advanced cryo-EM dat…	1	70	May 21, 2026
About the Scripting category	0	410	January 31, 2023
CS tools scripts for picking nanodiscs & dumbbell-shaped particles	1	67	May 21, 2026
Cryosparc tools wrapper & blueprint? feature_request	5	192	May 13, 2026
Notification bot for CS jobs	4	95	May 8, 2026
Optimal box size plotter	1	120	May 7, 2026
Group jobs in CS tools script?	1	46	May 5, 2026
Reset password using v5 cli	4	30	April 13, 2026
Same Job UIDs when running create_job()	1	29	April 9, 2026
Offline manual filtering of cryosparc particle stacks: how to export and re-import post-filtering	2	37	February 4, 2026
Symmetry expansion subset selection	11	227	December 18, 2025
Does the license key allow full access to cryosparc?	2	101	December 15, 2025
Visualising 2D Classes on Micrographs	4	189	October 16, 2025
Assign custom half-sets?	2	91	September 16, 2025
Extracting image analysis data from an active CSLive session?	1	210	September 12, 2025
Cryosparc-tools initial setup issues	2	126	August 29, 2025
Dynamic logging from cryosparc-tools	3	89	August 29, 2025
Safest way to kill a Live worker	2	95	August 27, 2025
Particle orientation details	2	89	August 12, 2025
Import ImageShift from .mdoc files (SerialEM) feature_request	13	986	July 30, 2025
Finding the workspace ID associated to a given session through the API	2	84	July 28, 2025
Calling an existing workflow from the CS API	10	208	July 11, 2025
Exporting jobs in an editable diagram for lab books or publication feature_request	3	127	June 12, 2025
Filtering jobs in cryosparc-tools	4	101	April 14, 2025
Generate High-Res 2D Classes example inconsistencies	1	105	January 10, 2025
Resolution index values for empirical dose weight numpy array	1	202	September 30, 2024
Cryosparctools failed to connect	14	795	September 19, 2024
CS tools "FileNotFoundError: No such file or directory"	1	718	August 23, 2024
CrypSPARC Tools, changing phase shifts for micrographs: which .cs file to use?	1	161	August 20, 2024
Cryosparc tool - installation & usage	1	341	June 7, 2024

New CryoSPARC Tools tutorial video: Simple scripting for advanced cryo-EM processing

education_and_advice

Hello CryoSPARC users! We have just published a CryoSPARC Tools tutorial video on our YouTube channel. It covers the basics of how to get started with CryoSPARC Tools + Python scripting to facilitate advanced cryo-EM dat…