I have been trying to test my cryosparc install with the extensive workflow for T20S. The import worked fine, however the patch motion is giving me the following error:
[CPU: 197.5 MB] Traceback (most recent call last): File "cryosparc2_worker/cryosparc2_compute/run.py", line 85, in cryosparc2_compute.run.main File "cryosparc2_master/cryosparc2_compute/jobs/motioncorrection/run_patch.py", line 363, in cryosparc2_compute.jobs.motioncorrection.run_patch.run_patch_motion_correction_multi AssertionError: Child process with PID 9312 has terminated unexpectedly!
I have followed previous threds with similar errors that seem to have been fixed through updating to more recent versions of cryosparc or with patches but I have these all up to date (Current version: v2.15.0+200728) but I am still getting this error.
For some additional information, I installed following quick installation instructions for a single workstation. The workstation has an AMD CPU with 3x2080Ti. I have recently installed CUDA 10.0 in addition to CUDA 8.0 but have carefully installed cryosparc with the cuda path to usr/local/cuda-10.0 so this shouldn’t be an issue. I did accidentally at one point install cuda 11 as some instructions on the nvidia website were a little unclear but as far as I’m aware I managed to purge this and autoremoved other dependencies so I don’t think this will be the issue.
Another error which may or may not be related occurred after I tried to run a 2D classification of some imported particles:
ImportError: libcurand.so.8.0: cannot open shared object file: No such file or directory
Although this seems CUDA toolkit related as I have libcurand.so.10.0 as part of cuda-10.0 so this is likely to be cuda related but not sure how to fix this either. I’m stumped and can’t get my install to work, help!