Hi @Tang,
It looks like the web application could not start due to the port 39000 already being used by the system.
-
Ensure cryoSPARC is turned off:
cryosparcm stop
-
Then, ensure no zombie processes are still running. Kill the processes if they are.
ps -ax | grep “supervisord” (kill only the process that is running from your cryosparc2 install)
ps -ax | grep “cryosparc2_command” (kill all the matching processes related to your cryosparc2
instance)
ps -ax | grep “mongod” (kill only the process running your cryosparc2 database)
e.g. kill 82681
- Remove the socket file inside the
/tmp
folder
/tmp/cryosparc-supervisor...XXX.sock
- Start cryoSPARC:
cryosparcm start
cryosparcm status
That should solve the problem, but if it doesn’t please take a look at this post: OtherError: "node is not in primary or recovering state" when connecting cluster
- Suhail