Using CryoSPARC in a SLURM cluster environment

Install, Configure and Update
1

Hi All,

We were asked by one of our researchers to install CryoSPARC in a way that will allow her to use it with our SLURM cluster. The problem is, that in order for CryoSPARC jobs that are sent into the cluster to be traceable (and billable). I have to tie CryoSPARC our LDAP users repo and use that instead of an internal users list.

So is there a way to do that. I looked up the documentation and I couldn’t find a way.

Many thanks

Oren

2

AFAIK cryosparc user database is internal and can’t be changed.
You can pass local cryosparc users as sbatch directives {job_creator} in the submission script and slurm can parse the usernames from that.

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