Patch CTF error v4.7.1

CTF Estimation
1

Hi I got this error when running patch CTF, anyone knows why? Now the job is still running and it only happened once.

Error occurred while processing J2/motioncorrected/001794916369515785800_FoilHole_20377983_Data_19316174_2_20250820_153922_fractions_patch_aligned.mrc
Traceback (most recent call last):
  File "/software/presto/e/13.1/software/cryosparc/4.7.1-foss-2023a-CUDA-12.1.1/cryosparc_worker/cryosparc_compute/jobs/pipeline.py", line 59, in exec
    return self.process(item)
  File "cryosparc_master/cryosparc_compute/jobs/ctf_estimation/run.py", line 137, in cryosparc_master.cryosparc_compute.jobs.ctf_estimation.run.run.ctfworker.process
ValueError: Encountered non-finite values in result diag_cc for J2/motioncorrected/001794916369515785800_FoilHole_20377983_Data_19316174_2_20250820_153922_fractions_patch_aligned.mrc

Marking J2/motioncorrected/001794916369515785800_FoilHole_20377983_Data_19316174_2_20250820_153922_fractions_patch_aligned.mrc as incomplete and continuing...
2

Welcome to the forum @HanW.

Please can you post the outputs of the following commands as text:

csprojectid=P99 # replace with actual project ID
csjobid=J199 # replace with ID of patch CTF job
cryosparcm cli "get_job('$csprojectid', '$csjobid', 'job_type', 'version', 'instance_information', 'status',  'params_spec', 'errors_run')"
cryosparcm joblog $csprojectid $csjobid | tail -n 40
cryosparcm eventlog $csprojectid $csjobid | tail -n 40

and also let us know if the Error occurs for all or only some exposures.

3

Thanks for reminding me! Just updated it.