Patch 211214 is available for cryoSPARC v3.3.1

Install, Configure and Update
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Release Notes

Includes all notes from previous patch 211202

Added

  • Specify path of directory containing preprocessed micrographs for Topaz Train and Extract
  • New 3D Classification advanced parameter “Output data after every full iter” to enable data outputs (volumes, particles, volume series) after every full iteration

Updated

  • 3D Classification volume outputs are now unmasked, fixing downstream refinements
  • New printout for each 3D Classification iteration to clearly specify O-EM/F-EM iterations left

Fixed

  • Use correct license check SSL certificate configuration when running cryoSPARC in insecure mode
  • Fixed Blob Tuner Error when Blob picker finds no particles
  • Passthrough GS split in 3D Classification
  • Check for empty splits in Homogenous Reconstruction job

Installation

See installation instructions here (cryoSPARC v3.3.1 required):
https://guide.cryosparc.com/setup-configuration-and-management/software-updates#apply-patches

6 Likes
3

The UID problem preventing csparc2star is still not corrected?

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@user123 I think it is in progress on the pyem side:

3 Likes
5

Thank you, I will be more patient. Was not sure if this was implemented, yet.

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Looks like it already has been, you just need to update pyem I believe

1 Like