No zip saved from 3D variability

open

(YIBIN) #1

Hi,
I just finished 3DV job normally but there are no zipped frames saved. There are only component_0.mrc, component_1.mrc and component_2.mrc.
Any suggestions in this regard would be very helpful.
Thanks
Yibin


(Stephan Arulthasan) #2

Hi @YXU,

Is it possible if you can paste the outputs of the job (minus the plots) that appear in the “Overview” tab of the job card?
Can you also post the output of cryosparcm joblog <project_uid> <job_uid>


(YIBIN) #3

Hi Stephan,
Here is information.
Thanks

Creating outputs..
Done.
Full run took 224374.600s
--------------------------------------------------------------
Compiling job outputs...
Passing through outputs for output group particles from input group particles
This job outputted results ['components_mode_0', 'components_mode_1', 'components_mode_2']
 Loaded output dset with 118496 items
Passthrough results ['blob', 'ctf', 'alignments3D', 'alignments2D', 'motion', 'location', 'pick_stats']
Loaded passthrough dset with 118496 items
Intersection of output and passthrough has 118496 items
Checking outputs for output group particles
***************************************************************
Job complete. Total time 224412.67s
Outputs

================= CRYOSPARCW =======  2019-07-24 16:13:01.193263  =========
Project P7 Job J1600
Master vc7-crspc-01.hpc.wehi.edu.au Port 39002
===========================================================================
========= monitor process now starting main process
MAINPROCESS PID 16003
========= monitor process now waiting for main process
MAIN PID 16003
var3D.run cryosparc2_compute.jobs.jobregister
========= sending heartbeat