I just have a problem while importing movies. Every time I import the movie and the reference file, it will show memory error. If I only import movies but no reference file, it works smoothly. Besides, if we only import one movie and reference, it works. Once we import more than one movies and a reference, it fails. That means, only the first movie is successful, it fails from the second one. But, we have to import gain reference file and many movies to perform a good reconstruction. Here’s the error information.
[CPU: 6.34 GB] Traceback (most recent call last): File "cryosparc2_master/cryosparc2_compute/run.py", line 82, in cryosparc2_compute.run.main File "cryosparc2_compute/jobs/imports/run.py", line 649, in run_import_movies_or_micrographs imgdata = mrc.read_mrc(abs_path).sum(axis=0) * gainref File "/home/pangguot/cryosparc/cryosparc2_master/deps/anaconda/lib/python2.7/site-packages/numpy/core/_methods.py", line 32, in _sum return umr_sum(a, axis, dtype, out, keepdims) MemoryError
I want to know if there is any way to modify the memory in this importing step?