Hi so I just installed the cryoSPARC2 and when it asked about downloading the test dataset, I answered no but it downloaded it anyway.
Download test dataset (EMPIAR-10025 subset: 20 Movies, 8.3GB) to /usr/local/cryosparc2/cryosparc2_master ?
1) Yes
2) No
#? 2
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 8282M 100 8282M 0 0 63.0M 0 0:02:11 0:02:11 --:--:-- 66.3M
You can download the test dataset later by running Downloading test data..
The following lines were appended to your ~/.bashrc:
export PATH=/usr/local/cryosparc2/cryosparc2_master/bin:$PATH
************ CRYOSPARC SYSTEM: STANDALONE INSTALLER **************
The installer will now download, install and connect the worker
package on this machine. The worker package will allow cryoSPARC
to run compute jobs.
******************************************************************
Starting cryoSPARC...
Starting cryoSPARC System master process..
Error!! The disk where the cryoSPARC database is installed has less than 5GB of free space.
Clear space before starting cryoSPARC.
Thankfully it did not fill up the disk but it came close.
$ ls -1 /usr/local/cryosparc2/cryosparc2_master/
bin
check_install_deps.sh
config.sh
cryosparc2_command
cryosparc2_compute
cryosparc2_webapp
deps
deps_bundle
deps_bundle_hashes
deps_hashes
empiar_10025_subset.tar
install.sh
run
setup_client_ipython.py
supervisord.conf
version
$ du -h /usr/local/cryosparc2/cryosparc2_master/empiar_10025_subset.tar
8.1G /usr/local/cryosparc2/cryosparc2_master/empiar_10025_subset.tar
Would you please fix this in the installation script? This could cause a lot of issues for people.