Incorrect symbolic link for imported data

[wtempel]

@mruetter

The symlinks of around ~1000 movies were not correct from ~55000 totally imported movies. Specifically, there was a duplication in the path.
This was the path of the correct symlink:

/scratch/tmp/cryosparc/projects/username/exampleproject/S1/import_movies/FoilHole_12193314_Data_12167612_10_20240915_010204_EER.eer -> /cloud/domain/group/cryodata/2024/exampleproject/Images-Disc1/GridSquare_12166570/Data/FoilHole_12193314_Data_12167612_10_20240915_010204_EER.eer

And here the incorrect symlink:

/scratch/tmp/cryosparc/projects/username/exampleproject/S1/import_movies/FoilHole_12193314_Data_12167612_10_20240915_010204_EER.eer -> /cloud/domain/group/cryodata/2024/exampleproject/Images-Disc1/GridSquare_12166570/GridSquare_12166570/Data/FoilHole_12193314_Data_12167612_10_20240915_010204_EER.eer

Thanks @mruetter for reporting this. I have created this forum topic for this question.

[wtempel]

@mruetter Please can you post the outputs of these commands (after replacing P99, S9 with the applicable project and Live session IDs, respectively):

ls -al /cloud/domain/group/cryodata/2024/exampleproject/Images-Disc1/GridSquare_12166570
cryosparcm icli # enter the cryosparc interactive cli
rtp.get_session('P99', 'S9')['exposure_groups']
exit() # exit the interactive cli