Heterogeneous Refinement crash

Troubleshooting
1

Please advise:

[CPU: 11.70 GB]  Traceback (most recent call last):
  File "/login/home/cryosparc_user/software/cryosparc3/cryosparc_worker/cryosparc_compute/jobs/runcommon.py", line 1811, in run_with_except_hook
    run_old(*args, **kw)
  File "cryosparc_worker/cryosparc_compute/engine/cuda_core.py", line 131, in cryosparc_compute.engine.cuda_core.GPUThread.run
  File "cryosparc_worker/cryosparc_compute/engine/cuda_core.py", line 132, in cryosparc_compute.engine.cuda_core.GPUThread.run
  File "cryosparc_worker/cryosparc_compute/engine/engine.py", line 1028, in cryosparc_compute.engine.engine.process.work
  File "cryosparc_worker/cryosparc_compute/engine/engine.py", line 107, in cryosparc_compute.engine.engine.EngineThread.load_image_data_gpu
  File "cryosparc_worker/cryosparc_compute/engine/gfourier.py", line 32, in cryosparc_compute.engine.gfourier.fft2_on_gpu_inplace
  File "/login/home/cryosparc_user/software/cryosparc3/cryosparc_worker/cryosparc_compute/skcuda_internal/fft.py", line 134, in __init__
    onembed, ostride, odist, self.fft_type, self.batch)
  File "/login/home/cryosparc_user/software/cryosparc3/cryosparc_worker/cryosparc_compute/skcuda_internal/cufft.py", line 749, in cufftMakePlanMany
    cufftCheckStatus(status)
  File "/login/home/cryosparc_user/software/cryosparc3/cryosparc_worker/cryosparc_compute/skcuda_internal/cufft.py", line 124, in cufftCheckStatus
    raise e
cryosparc_compute.skcuda_internal.cufft.cufftAllocFailed
2

Welcome to the forum @Yehuda .
This job may be running out of GPU memory. Memory use depends, among other parameters, on

  • the number of classes
  • the box size

Please can you share those parameters, along with information listed in the Environment section of the Troubleshooting Guidelines.