Hi, I tried the new Gctf wrapper in v2.4, but it failed, complaining I need to provide it with movies, even though I only selected micrograph input (and I provided it with imported micrographs as input).
I imported micrographs aligned outside of CryoSPARC, which has worked fine in the past when using the CTFFIND wrapper.
I tried performing gctf estimations on aligned micrographs in cryosparc (v2.4) and after having experienced the same input error as mentioned above by olibclarke (about micrographs vs movies), cryosparc was updated to the latest version - v2.4.6. However, I still get the same error…
@stephan I tried this and it seemed to have taken care of the old problem but I get a new error now:
Traceback (most recent call last):
File "cryosparc2_worker/cryosparc2_compute/run.py", line 78, in cryosparc2_compute.run.main
File "cryosparc2_compute/jobs/ctf/run.py", line 314, in run_ctf_estimation_gctf
if not n.isclose(params['ac'],micrographs_dset.data['ctf/amp_contrast']):
ValueError: no field of name ctf/amp_contrast