Good afternoon,
I have got an error during when I tried to run Homogeneous Refinement. Please find the Error log below.
I have tried to use the MRC map that I have generated using crystallography PDB converted with “molmap” command in Chimera and saved as MRC from volume viewer.
Traceback (most recent call last):
** File “cryosparc_worker/cryosparc_compute/run.py”, line 84, in cryosparc_compute.run.main**
** File “cryosparc_worker/cryosparc_compute/jobs/refine/newrun.py”, line 327, in cryosparc_compute.jobs.refine.newrun.run_homo_refine**
** File “/home/giovgonz/software/cryosparc/v3/cryosparc_worker/cryosparc_compute/newfourier.py”, line 416, in resample_resize_real**
** return ZT( ifft( ZT(fft(x, stack=stack), N_resample, stack=stack), stack=stack), M, stack=stack), psize_final**
** File “/home/giovgonz/software/cryosparc/v3/cryosparc_worker/cryosparc_compute/newfourier.py”, line 107, in fft**
** return fftcenter3(x, fft_threads)**
** File “/home/giovgonz/software/cryosparc/v3/cryosparc_worker/cryosparc_compute/newfourier.py”, line 72, in fftcenter3**
** assert all([d%2 == 0 for d in vol.shape])**
AssertionError
Please let me know if the error appearance may depend on the input file and if so what I am doing wrong.
Thank you
Best regards
Dmytro