CryoSPARC Conda environment

Install, Configure and Update
1

Hi All,

We have a CryoSPARC master that submits tasks to CryoSPARC workers via our SGE scheduler.

Do the worker instances need access (i.e. through a shared filesystem) to the conda environment that gets created on the master node during CryoSPARC installation?

Cheers.

2

Welcome to the forum @mjkenyon .
Only the CryoSPARC master host needs access to the cryosparc_master/ directory. the cryosparc_worker/ installation has its own conda environment and does not need access to the master’s.
CryoSPARC worker hosts interact with the CryoSPARC master host via the database ($((CRYOSPARC_BASE_PORT+1)) ), command core ($((CRYOSPARC_BASE_PORT+2)) ) and Live command RTP ($((CRYOSPARC_BASE_PORT+6)) ) network ports of the master host.

3

Hi @wtempel

Thanks for the clarification and the link to the documentation.

Cheers.