rwaldo
January 9, 2025, 3:34pm
21
Hi @vincent ! If you have .cs files from your collaborator, you should be able to open them like so:
from cryosparc.dataset import Dataset
dset = Dataset.load("path/to/dataset.cs")
From there, the dset object will act the same as if you had loaded it using job.load_output("output_name").
vincent
January 10, 2025, 8:59am
22
Hi @rwaldo ,
thank you so much for your quick response.
I was able to do this image using this script.
It shows a non-gaussian distribution, in which we can visualize a very interesting biological movement, highly relevant! very cool.
Cheers
Vincent
import plotnine
cloud c0 vs c1
cloud=(
plotnine.ggplot(data = df, mapping = plotnine.aes(x = ‘c0’, y = ‘c1’))
+ plotnine.geom_point(shape = “1”, size = 0.01)
+ plotnine.geom_bin2d(bins = 1000)
+ plotnine.scale_fill_continuous(type =“viridis”)
+ plotnine.coord_cartesian(xlim=(-100, 100), ylim=(-100,100))
)
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