Reassign particles to micrographs w/ missing items

Right now Reassign Particles to Micrographs will fail if some of the particles have micrograph paths that aren’t in the exposure input. Would be nice to get “failed_x” outputs for those instead, and have usable outputs for the matching subset.

3 Likes

Hi @DanielAsarnow , we’ve noted this feature request.

1 Like

This is much needed! I was actually under the impression that this would not happen, so I was confused that my job was failing, until I found Daniel’s post.

Please make it available as soon as possible =)

@DanielAsarnow, what workaround did you employ meanwhile?

Cheers!
Andre’

Not tested, but if you run a curate micrographs job first, you should get a particle output just corresponding to the particles on the input micrographs - I believe this should work as a workaround

1 Like

I think I did something like @olibclarke’s suggestion here.

1 Like