Hi everyone,
I’m running patch motion correction across 3 GPUs, and suddenly get:
Error occurred while processing J1/imported/000743242479319054128_FoilHole_15572093_Data_15571473_15571475_20230315_114910_fractions.tiff
Traceback (most recent call last):
File "/opt/cryosparc/cryosparc_worker/cryosparc_compute/jobs/pipeline.py", line 60, in exec
return self.process(item)
File "cryosparc_master/cryosparc_compute/jobs/motioncorrection/run_patch.py", line 177, in cryosparc_compute.jobs.motioncorrection.run_patch.run_patch_motion_correction_multi.motionworker.process
File "cryosparc_master/cryosparc_compute/jobs/motioncorrection/run_patch.py", line 180, in cryosparc_compute.jobs.motioncorrection.run_patch.run_patch_motion_correction_multi.motionworker.process
File "cryosparc_master/cryosparc_compute/jobs/motioncorrection/run_patch.py", line 182, in cryosparc_compute.jobs.motioncorrection.run_patch.run_patch_motion_correction_multi.motionworker.process
File "cryosparc_master/cryosparc_compute/jobs/motioncorrection/patchmotion.py", line 255, in cryosparc_compute.jobs.motioncorrection.patchmotion.unbend_motion_correction
File "cryosparc_master/cryosparc_compute/jobs/motioncorrection/patchmotion.py", line 311, in cryosparc_compute.jobs.motioncorrection.patchmotion.unbend_motion_correction
AssertionError: Not enough patches to constrain spline fit
Marking J1/imported/000743242479319054128_FoilHole_15572093_Data_15571473_15571475_20230315_114910_fractions.tiff as incomplete and continuing...
image parameters are following:
[CPU: 249.8 MB Avail: 214.63 GB]
mscope_params/accel_kv : {300.0}
[CPU: 249.8 MB Avail: 214.63 GB]
mscope_params/cs_mm : {2.7}
[CPU: 249.8 MB Avail: 214.63 GB]
mscope_params/total_dose_e_per_A2 : {50.0}
[CPU: 249.8 MB Avail: 214.63 GB]
mscope_params/exp_group_id : {0}
[CPU: 249.8 MB Avail: 214.63 GB]
mscope_params/phase_plate : {0}
[CPU: 249.8 MB Avail: 214.63 GB]
mscope_params/neg_stain : {0}
[CPU: 249.8 MB Avail: 214.63 GB]
movie_blob/psize_A : {836.0}
[CPU: 249.8 MB Avail: 214.63 GB]
movie_blob/shape : [ 50 4092 5760]
[CPU: 249.8 MB Avail: 214.63 GB]
movie_blob/is_gain_corrected : {0}