February 3, 2023, 7:56am
does anyone else suffer from massively reduced computing speed for NU refinement after updating cryosparc?
Similar jobs that ran before ~6h take now ~42h on the same machine. This is a huge slow down and as far as I can tell exclusive for NU.
February 3, 2023, 2:10pm
What where the CryoSPARC versions (and patch levels) for the 6h and 42h runtimes, respectively?
If you have a pair of job clones with identical parameters and inputs:
one run before upgrade to v4.1
clone of (1.) run on the same worker after the upgrade
for direct comparison, please could you send us for both jobs:
output redirected to a file for
cryosparcm cli "get_job_streamlog('PX', 'JY')" > streamlog_PX_JY.out
February 5, 2023, 6:35pm
Will send you the requested files separately.
Thanks for investigating.
February 14, 2023, 3:59pm
@tarek Is it still true that
Did you run a variety of NU-refinement jobs after upgrading to v4.1 and have the impression that all of them are similarly affected?