Managing CryoSPARC real-time sessions through the CLI, is it possible to have an interface that saves the data of the steps of the motion correction as float16?

CryoSPARC Live
1

According to this link, Managing a CryoSPARC Live Session from the CLI | CryoSPARC Guide

I didn’t find a corresponding interface, is there an interface that allows me to save “motion correction” data as float16?

2

Recent versions of CryoSPARC allow you to select Save results in 16-bit floating point in the Motion Correction and Particle Extraction sections of Parameters.

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3

What I mean is whether cli provides an interface to turn on this option is similar to the
rtp.set_param(project_uid=project_uid, session_uid=session_uid, param_sec=’ motion_settings’, param_name=‘save_as_float16’, value=1)

4

It does:

rtp.set_param(project_uid=project_uid, session_uid=session_uid, param_sec='motion_settings', param_name='output_f16', value=True)
rtp.set_param(project_uid=project_uid, session_uid=session_uid, param_sec='extraction', param_name='output_f16', value=True)
5

Thank you so much, this helps me a lot!

6

Is there an api to see the current number of Total Exposures and Processed exposures for cryosparc live?

7

@yaohua The commands
cryosparcm rtpcli "get_session_doc('PXX', 'SYY')['stats']['total_exposures']"
cryosparcm rtpcli "get_session_doc('PXX', 'SYY')['stats']['total_ready']"

Where PXX and SYY are the project number and session number will give you the number of total exposures and processed exposures for a real time session.