We were wondering if it would be possible to provide local default values for certain cryoSPARC job fields. In particular, we would like to have a way to create a local default value for “Path to Topaz executable” so that the user doesn’t need to remember and type in this value each time they create a job. Is there currently a way to do this (other than hardcoding the values in build_topaz.py and build_topaz_denoise.py)? If not, perhaps this would be a feature worth adding to cryoSPARC.
Thanks… that would be a help but it’s still less than optimal. Our users don’t have direct access to the cryosparcm command as the cryoSPARC user. Perhaps I could write a script that would execute sudo to run cryosparcm as the cryoSPARCM user, something like “set-topaz-path <project_id>”.
But it would be ideal to have some way of setting site defaults that would take effect for the installation as a whole. I could easily set these values as the system administrator and that would remove one more obstacle for the users.