Hi @DanielAsarnow thanks for posting.
Right now this is not possible in a straightforward way because patch motion also does background subtraction, and so the output micrograph from patch motion is different than the input (even if it’s a 1 frame micrograph) and the downstream steps in Live require that the micrographs they read are already background subtracted on disk (meaning that we still need to make a copy of the input micrograph).
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