I have done a fresh installation of cryo sparc 2.15.0 on CentOS7 using standalone installation
The installation seems complete. However while I try to run " import micrographs" I receive a notification on top “list index out of range”
While the job status becomes “queued” and does not change to running.
When I open up the job status log
it shows repeated instances of “License is valid.” and appears to be stuck in a loop.
[user@localhost cryosparc2_master]$ cryosparcm status
----------------------------------------------------------------------------
CryoSPARC System master node installed at
/home/user/Softwares/cryosparc/cryosparc2_master
Current cryoSPARC version: v2.15.0
----------------------------------------------------------------------------
cryosparcm process status:
app STOPPED Not started
app_dev STOPPED Not started
command_core RUNNING pid 19108, uptime 0:11:05
command_proxy RUNNING pid 19256, uptime 0:11:02
command_rtp STOPPED Not started
command_vis RUNNING pid 19213, uptime 0:11:03
database RUNNING pid 18917, uptime 0:11:08
watchdog_dev STOPPED Not started
webapp RUNNING pid 19347, uptime 0:11:01
webapp_dev STOPPED Not started
----------------------------------------------------------------------------
global config variables:
export CRYOSPARC_LICENSE_ID="xxx"
export CRYOSPARC_MASTER_HOSTNAME="localhost"
export CRYOSPARC_DB_PATH="/home/user/Softwares/cryosparc/cryosparc2_database"
export CRYOSPARC_BASE_PORT=39010
export CRYOSPARC_DEVELOP=false
export CRYOSPARC_INSECURE=false
export CRYOSPARC_CLICK_WRAP=true