We were running cryosparc-live on a collection and we collected 600+ images just fine and now suddenly during the picking step in the live processing it’s throwing the following error:
Traceback (most recent call last):
File “cryosparc_master/cryosparc_compute/jobs/rtp_workers/run.py”, line 371, in cryosparc_compute.jobs.rtp_workers.run.rtp_worker
File “cryosparc_master/cryosparc_compute/jobs/rtp_workers/run.py”, line 434, in cryosparc_compute.jobs.rtp_workers.run.process_movie
File “cryosparc_master/cryosparc_compute/jobs/rtp_workers/run.py”, line 950, in cryosparc_compute.jobs.rtp_workers.run.do_pick
File “/gs1/RTS/EM/Software/CryoSPARCv2/cryosparc2_worker/cryosparc_tools/cryosparc/dataset.py”, line 1251, in take
return type(self)([(f, self[f][indices]) for f in self])
File “/gs1/RTS/EM/Software/CryoSPARCv2/cryosparc2_worker/cryosparc_tools/cryosparc/dataset.py”, line 1251, in
return type(self)([(f, self[f][indices]) for f in self])
IndexError: index 6 is out of bounds for axis 0 with size 0
Has anyone encountered this before? Know a solution? Thanks all!