I removed initial all-movies job, but if I run it on failed micrograph only, I get this:
================= CRYOSPARCW ======= 2022-12-23 22:50:17.284392 =========
Project P58 Job J15
Master cmm-1 Port 39002
========= monitor process now starting main process
MAINPROCESS PID 27939
========= monitor process now waiting for main process
MAIN PID 27939
========= sending heartbeat
========= main process now complete.
========= monitor process now complete.
on a v4.1.1 instance (with an unreleased, unrelated patch).
In case this observation motivates an update of your instance, I recommend preparing the update by ensuring prerequisites for the potential installation of 3DFlex dependencies even if you do not plan to install those dependencies immediately.
I see, thanks. Perhaps this was an issue with wget not ensuring download correctly, and not with the file itself.
Although, it doesn’t change the second part of the message: if one of the tif files is damaged, I’d expect it to fail into the “Failed movies”, and not to fail the whole process itself. Not sure if that was the designed behavior though.