Error with Import Micrograph

closed

#1

icense is valid.

Running job on master node

Project P1 Job J2 Started

Master running v2.5.0, worker running v2.5.0

Running on lane default

Resources allocated:

Worker: dgl-Precision-7920-Tower


Importing job module for job type import_micrographs…

Job ready to run


Traceback (most recent call last):
File “cryosparc2_master/cryosparc2_compute/run.py”, line 78, in cryosparc2_compute.run.main
File “cryosparc2_compute/jobs/imports/run.py”, line 399, in run_import_movies_or_micrographs
path_glob = os.path.expandvars(params[‘blob_paths’])
File “/home/dgl/cryosparc/cryosparc2_master/deps/anaconda/lib/python2.7/posixpath.py”, line 287, in expandvars
if ‘$’ not in path:
TypeError: argument of type ‘NoneType’ is not iterable


#2

Hi @Bruk

What path did you enter in the Micrographs data path parameter of the Import Micrographs job?


#3

Hi,

Restarting cryosparc and the job seems to have done the trick! thanks!

Bruk