Deep Picker Train: No particles corresponding to input micrographs were found

Particle Picking
1

Dear colleagues,

Running the Deep Picker Train (BETA)

I got the following issue

[CPU: 580.4 MB] Traceback (most recent call last):
File “cryosparc_worker/cryosparc_compute/run.py”, line 85, in cryosparc_compute.run.main
File “cryosparc_worker/cryosparc_compute/jobs/deep_picker/run_deep_picker.py”, line 255, in cryosparc_compute.jobs.deep_picker.run_deep_picker.run_deep_picker_train
AssertionError: No particles corresponding to input micrographs were found. Ensure that non-zero particle picks were input and that the particle picks are from the input micrographs.

I tried also running without threads, but the process again stopped without giving any error.

Is there any solution?

Kind regards,
Dmitry

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2

Were there any errors in job.log?

1 Like
3

no, there was nothing …

4

Please can you post

  • contents job.json for this job
  • the job type that produced the input particles
  • the job type used for particle picking
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