Align 3D maps mask input?

[olibclarke]

Hi,

It would be useful if Align 3D maps accepted a mask input (and transformed it in the same way as the matching map for alignment). That way, if I wanted to match two refinements where I have local masks, I could do it entirely within cryosparc, rather than having to make a new mask and port it over.

Cheers
Oli

[kstachowski]

Hi @olibclarke,

You should be able to switch on mask inputs in the parameters section of the job.

Best,
Kye

[olibclarke]

Don’t know how I missed that, thanks Kye! I think I read it and interpreted it as it was going to auto-calculate a mask - this makes a lot more sense!