Unfortunately, I cannot provide a resolution for this issue, but have a few suggestions:
- Did you confirm that TOPAZ tasks run properly when run/initiated outside CryoSPARC?
- Given that current instructions for the creation of the conda environment
did you confirm that TOPAZ can run in a python-3.10 environment?conda create -n topaz python=3.6
- After confirming TOPAZ function outside CryoSPARC, you may want to wrap TOPAZ in a shell script, which in turn should be specified as Path to Topaz executable (details).
- See Topaz Train - TypeError: concat() takes 1 positional argument but 2 were given for a related discussion.