Cryosparc cannot determine topaz version

Particle Picking
6

@akw If

  • you have sufficient control over the computer(s) where your CryoSPARC instance is running
  • and your GPUs are recent enough models

may I suggest:

  1. ensuring the nvidia drivers are at version 520.61.05 or above. In case a driver upgrade is required, ensure the computer is rebooted after the driver upgrade and
    nvidia-smi correctly reports installed GPUs and driver version
  2. then, installing topaz in a new conda environment, as described in Topaz Train - TypeError: concat() takes 1 positional argument but 2 were given - #17 by wtempel
  3. then, confirming topaz function on the command line
  4. then, upgrading CryoSPARC