Monitoring CPU, Memory and GPU Usage [Tips] (2)

When running cryoSPARC, it can be valuable to keep track of your worker instance’s hardware statistics to understand more about the resource usage of a job. In particular, monitoring the utilization of GPUs running cryoS…

Csparc2star.py final update ( 2 ) [Import and Export] (23)

Hi csparc2star.py users. I made a major change to csparc2star.py in what is very likely to be the last update given the upcoming built-in import/export tools. The new version supports any number of .cs files as input. T…

Before You Post: Troubleshooting Guidelines [Troubleshooting] (1)

[image] Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. To make it easier for us to understand and troubleshoot issues and errors encountered, please use the following template to pr…

Resolution worse in homogeneous refinement than in heterogeneous refinement [3D Refinement] (1)
How to combine/merge 2 (or more) sets of particles into a new dataset [Utilities] (3)
Non-uniform refinement error [3D Refinement] (1)
Weird behavior when doing NU refinement with particles previously aligned to a different reference [Troubleshooting] (1)
3D-FSC does not accept masks [Troubleshooting] (1)
Output particles in "intermediates" mode of 3D-variability display? [3D Variability Analysis] (1)
Using "generate new FSC mask" option in Sharpening tools gives error [Troubleshooting] (1)
Memory issues on cluster [Troubleshooting] (8)
Topaz in cryosparc error [Troubleshooting] (3)
Gain reference for TIFF files [Motion Correction] (14)
Cryosparc Install v2 Master [Troubleshooting] (3)
Refinement with downsampled particles gives weird FSC [Troubleshooting] (15)
Installation error: No module named numpy.distutils.core [Install, Configure and Update] (3)
Import micrographs permissions error [Troubleshooting] (4)
Resurrection of old project [Import and Export] (1)
Relion3.1 merged dataset to cryosparc [Import and Export] (1)
Strange output from Patch CTF [Troubleshooting] (3)
Star or tag jobs [feature request] [Features and Functionality] (3)
Patch motion continue failed job [Motion Correction] (3)
Normal orthogonal slices for one of our single eigenvector in 3D var [3D Variability Analysis] (2)
Particle subtraction failure [Local Refinement] (5)
Huge dip in the FSC curve [Troubleshooting] (4)
'List index out of range' during Import Particles - v2.12.4 [Troubleshooting] (6)
Import Micrographs broken in 2.12? ( 2 ) [Troubleshooting] (29)
Daemon_vis restarting constantly [Troubleshooting] (14)
Symmetry and ab initio refinement [Tips] (3)
Only cache subset of particles [Features and Functionality] (3)