Monitoring CPU, Memory and GPU Usage [Tips] (2)

When running cryoSPARC, it can be valuable to keep track of your worker instance’s hardware statistics to understand more about the resource usage of a job. In particular, monitoring the utilization of GPUs running cryoS…

Csparc2star.py final update ( 2 ) [Import and Export] (23)

Hi csparc2star.py users. I made a major change to csparc2star.py in what is very likely to be the last update given the upcoming built-in import/export tools. The new version supports any number of .cs files as input. T…

Before You Post: Troubleshooting Guidelines [Troubleshooting] (1)

[image] Dear cryoSPARC users, Thank you for communicating with us on the discussion forum. To make it easier for us to understand and troubleshoot issues and errors encountered, please use the following template to pr…

Export particles coordinates to relion for re-extraction [Import and Export] (3)
Database failure [Troubleshooting] (2)
Squashed ab initio model for icosahedral virus [CryoSPARC Parameters] (1)
Symmetry expand and particle subtraction [Local Refinement] (1)
How is cluster_job_id generated? [Install, Configure and Update] (1)
"Load more" fails to show any more jobs from the history [Troubleshooting] (3)
Extract job history - How? [Features and Functionality] (2)
Sharing same database between different instances [Install, Configure and Update] (3)
MotionCor2 error [Motion Correction] (6)
Merging two data sets with different pixel size [Cryo-EM Data Processing] (6)
Multiple GPUs but always GPU 0 assigned [Troubleshooting] (3)
What is the "export" feauture? [Install, Configure and Update] (1)
ERROR: No supported gcc/g++ host compiler found [Troubleshooting] (2)
Error: cuInit failed: unknown error (during refinement) [Uncategorized] (1)
cufftAllocFailed in 2D classification [Troubleshooting] (1)
The ab initio reconstructions generated wrong initial models [3D Reconstruction] (9)
Daemon_vis restarting constantly [Troubleshooting] (7)
Particle extraction with local motion correction using existing trajectory [Features and Functionality] (1)
cryoSPARC is running but supervisorctl doesn't think so [Troubleshooting] (1)
File r/w permissions [Install, Configure and Update] (1)
Standalone installation option as root [Install, Configure and Update] (1)
Import micrographs error [Import and Export] (1)
Inspect Particle Picks: Suggestions and Feature Requests [Particle Picking] (2)
Installation problem [Install, Configure and Update] (3)
Computer restarts - memory - graphics-gpu -settings [Troubleshooting] (4)
Web app doesn't load, status is normal [Troubleshooting] (6)
Cryosparcm updateuser requires knowing a user's password [Features and Functionality] (4)